PyMOL v1.7.2.0 Notes
Release Date: August 4, 2014.
Graphics
Commands
volume now takes a ramp as its third argument
volume_color can color volumes by custom ramps and ramp presets
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desaturate desaturates colors
join_states creates a multi-state object from multiple objects
alphatoall transfers atom properties from the CA atoms to the full residue
loadall loads all files from a file name pattern
centerofmass calculates the center of mass
extra_fit performs a many-to-one alignment
api queries
API details about a command
Misc
mmCIF loading improvements:
multi-model support
read secondary structure
iterate/alter/label “s.” setting autocompletion
better internal
GUI menu performance by submenu callable support
run pml and py script with “load”
support ccp4 maps with mode 0 and 1
Simple text editor to edit pymolrc (Tk
GUI: File > Edit pymolrc)
Settings
volume_mode to toggle between post-classified and pre-integrated volume rendering
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Bug Fixes
fix distorted labels with stereo walleye/crosseye
fix atom properties: assign empty string
fix cartoon picking doesn't honor masking atoms/objects
fix: cyclic nucleotide was marked as polymer
PyMOL v1.7.2.1 Hotfix Notes
PyMOL v1.7.2.2 Hotfix Notes
PyMOL v1.7.2.3 Hotfix Notes